CDS

Accession Number TCMCG057C28636
gbkey CDS
Protein Id XP_018491792.1
Location complement(join(39592533..39592619,39592731..39592799,39592889..39592971,39593072..39593150,39593231..39593395,39593514..39593558,39593653..39593727,39593961..39594137,39594237..39594482,39594710..39594886))
Gene LOC108862227
GeneID 108862227
Organism Raphanus sativus

Protein

Length 400aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018636290.1
Definition PREDICTED: indole-3-glycerol phosphate synthase, chloroplastic [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category E
Description Indole-3-glycerol phosphate synthase
KEGG_TC -
KEGG_Module M00023        [VIEW IN KEGG]
KEGG_Reaction R03508        [VIEW IN KEGG]
KEGG_rclass RC00944        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01609        [VIEW IN KEGG]
EC 4.1.1.48        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00400        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00400        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0000162        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004425        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005507        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006568        [VIEW IN EMBL-EBI]
GO:0006576        [VIEW IN EMBL-EBI]
GO:0006586        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008652        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009072        [VIEW IN EMBL-EBI]
GO:0009073        [VIEW IN EMBL-EBI]
GO:0009308        [VIEW IN EMBL-EBI]
GO:0009309        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016830        [VIEW IN EMBL-EBI]
GO:0016831        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042401        [VIEW IN EMBL-EBI]
GO:0042430        [VIEW IN EMBL-EBI]
GO:0042435        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044106        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046219        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901605        [VIEW IN EMBL-EBI]
GO:1901607        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGCACTAGTTCCGGTTCAAAGTGCTGGACAGAGACTTCCGGTTAGACTGGTCTCACCTTCTCTCCATCGGTGTATCGGTTCTGTCTCCATCAGACGTCCAGTCTCAGGTTTTGCCATGGACACAAGGATCAGTTCCAAAACTCCGTCGCAGTTCACGATCCGGGCTCAACAGAGCTTAGGTGTTGCTTCTTCTTCTTCTTCTTCATCAGTAGAGAATGATCTAAGAATCAAGGAATGGGAAGTAGACATGTATCAGAATGAATTAGCTATTAGCCAAGGTATCAGGATCAGGAGAAAACCACCAAGCAAGGCTCCACTGGGATATTCTGGACCCTTTGAGCTAAGATTGCATAATGCTGATTCTCCCACTAACATCTTGGAGGAGATTACTTGGTACAAAGACCAAGAAGTTTCCAGGATGAAGGAAGTGAACCCACTTGAGGCGTTAAAGAAAGCTGTAGAGAATGCTCCTCCCACTAGGGATTTTGTGGGTGCGCTTAGGATGGCTCATCAAAGGACTGGCTTCCCTGCTTTGATCGCTGAGGTTAAGAAGGCTTCTCCTAGTAGAGGAATCCTGAAAGAGAATTTTGACCCGGTCGAGATTGCTCAAGCTTATGAAAGAGGCGGTGCTGCATGTCTCAGTGTTTTGACTGACCAAAAATATTTCAAGGGAGGTTTTGAAAACTTGGAAGCAATAAGAAGCGCTGGTGTGAAGTGTCCCCTATTATGCAAAGAGTTTATTGTAGATCCATGGCAGATCTACTATGCTCGGACTAAAGGTGCTGACGCAGTTTTGCTCATTGCTGCTATATTGACTGACCTGGAAATAACCTACTTGCTTAAGCTCTGCAAGAAGCTTGGTTTGGCTACCCTTGTTGAGGTGCACGATGAGAGAGAGATGGGTCGTGTTCTTGGGATAGAAGGGATCGAGCTTGTTGGCATCAATAACCGAAGTCTTGAAACATTTAAGGTGGACATTAGTAATACAAAGAAGCTTCTTGAAGGGGAGCATGGTAGACAAATCCGCGAGAAAGACATGATTGTGGTTGGTGAATCTGGTTTGTTTACACCTGATGATATTGCCTATGTACAAGCCGCTGGAGTTAAAGCGGTATTGGTTGGTGAGTCCATTGTGAAGCAAAACGACCCTGAGAAAGGCATAGCTGGACTCTTTGGCAAGAACATTTCTCATACTTAG
Protein:  
MEALVPVQSAGQRLPVRLVSPSLHRCIGSVSIRRPVSGFAMDTRISSKTPSQFTIRAQQSLGVASSSSSSSVENDLRIKEWEVDMYQNELAISQGIRIRRKPPSKAPLGYSGPFELRLHNADSPTNILEEITWYKDQEVSRMKEVNPLEALKKAVENAPPTRDFVGALRMAHQRTGFPALIAEVKKASPSRGILKENFDPVEIAQAYERGGAACLSVLTDQKYFKGGFENLEAIRSAGVKCPLLCKEFIVDPWQIYYARTKGADAVLLIAAILTDLEITYLLKLCKKLGLATLVEVHDEREMGRVLGIEGIELVGINNRSLETFKVDISNTKKLLEGEHGRQIREKDMIVVGESGLFTPDDIAYVQAAGVKAVLVGESIVKQNDPEKGIAGLFGKNISHT